Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RNF20Q5VTR2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF20Q5VTR2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF20Q5VTR2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RNF20Q5VTR2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF20Q5VTR2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RNF20Q5VTR2 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.51■□□□□ 0.55
RNF20Q5VTR2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 AC092183.1-201ENST00000469884 875 ntBASIC18.51■□□□□ 0.55
RNF20Q5VTR2 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 AC135586.1-201ENST00000539323 574 ntBASIC18.51■□□□□ 0.55
RNF20Q5VTR2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 AL161772.1-201ENST00000610494 4412 ntBASIC18.51■□□□□ 0.55
RNF20Q5VTR2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RNF20Q5VTR2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RNF20Q5VTR2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 MYO15B-237ENST00000642007 4893 ntBASIC18.49■□□□□ 0.55
RNF20Q5VTR2 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 FAM8A3P-201ENST00000427218 844 ntBASIC18.49■□□□□ 0.55
RNF20Q5VTR2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 RFPL4AP1-201ENST00000530883 850 ntBASIC18.49■□□□□ 0.55
RNF20Q5VTR2 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF20Q5VTR2 SRD5A3P1-201ENST00000603021 949 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms