Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RAE1P78406 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.66□□□□□ -0.06
RAE1P78406 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.66□□□□□ -0.06
RAE1P78406 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.66□□□□□ -0.06
RAE1P78406 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 AC005498.2-205ENST00000593218 784 ntBASIC14.66□□□□□ -0.06
RAE1P78406 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
RAE1P78406 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
RAE1P78406 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.66□□□□□ -0.06
RAE1P78406 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RAE1P78406 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.65□□□□□ -0.06
RAE1P78406 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RAE1P78406 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.65□□□□□ -0.06
RAE1P78406 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.65□□□□□ -0.06
RAE1P78406 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.65□□□□□ -0.06
RAE1P78406 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.65□□□□□ -0.06
RAE1P78406 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.65□□□□□ -0.06
RAE1P78406 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.65□□□□□ -0.06
RAE1P78406 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.65□□□□□ -0.06
RAE1P78406 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.65□□□□□ -0.06
RAE1P78406 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.65□□□□□ -0.06
RAE1P78406 AC104794.3-201ENST00000566840 1248 ntBASIC14.65□□□□□ -0.06
RAE1P78406 SAMD11P1-201ENST00000571429 661 ntBASIC14.65□□□□□ -0.06
RAE1P78406 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.65□□□□□ -0.06
RAE1P78406 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 AC068418.2-201ENST00000577309 3703 ntBASIC14.65□□□□□ -0.06
RAE1P78406 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAE1P78406 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
RAE1P78406 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.65□□□□□ -0.06
RAE1P78406 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RAE1P78406 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RAE1P78406 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.65□□□□□ -0.07
RAE1P78406 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAE1P78406 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAE1P78406 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAE1P78406 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RAE1P78406 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RAE1P78406 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RAE1P78406 AC007292.2-201ENST00000593524 1812 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms