Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.15□□□□□ -0.14
CXCR4P61073 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.15□□□□□ -0.14
CXCR4P61073 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CXCR4P61073 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCR4P61073 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.15□□□□□ -0.14
CXCR4P61073 AC098859.1-201ENST00000502915 1238 ntBASIC14.15□□□□□ -0.14
CXCR4P61073 RNA5SP419-201ENST00000515908 135 ntBASIC14.15□□□□□ -0.14
CXCR4P61073 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCR4P61073 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.15□□□□□ -0.14
CXCR4P61073 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CXCR4P61073 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.15□□□□□ -0.14
CXCR4P61073 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CXCR4P61073 KRT8P37-201ENST00000451609 1420 ntBASIC14.15□□□□□ -0.14
CXCR4P61073 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CXCR4P61073 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.15□□□□□ -0.15
CXCR4P61073 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC14.15□□□□□ -0.15
CXCR4P61073 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.14□□□□□ -0.15
CXCR4P61073 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCR4P61073 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.14□□□□□ -0.15
CXCR4P61073 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.14□□□□□ -0.15
CXCR4P61073 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 AC068137.2-201ENST00000605408 478 ntBASIC14.14□□□□□ -0.15
CXCR4P61073 AC064836.3-201ENST00000607928 673 ntBASIC14.14□□□□□ -0.15
CXCR4P61073 MST1P2-201ENST00000457982 2291 ntBASIC14.14□□□□□ -0.15
CXCR4P61073 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCR4P61073 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCR4P61073 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.14□□□□□ -0.15
CXCR4P61073 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CXCR4P61073 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CXCR4P61073 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.14□□□□□ -0.15
CXCR4P61073 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CXCR4P61073 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
CXCR4P61073 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CXCR4P61073 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CXCR4P61073 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.13□□□□□ -0.15
CXCR4P61073 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
CXCR4P61073 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms