Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AC005332.1-201ENST00000577698 1310 ntBASIC11.46□□□□□ -0.57
CKS2P33552 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
CKS2P33552 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CKS2P33552 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
CKS2P33552 AL596275.1-201ENST00000423464 877 ntBASIC11.46□□□□□ -0.57
CKS2P33552 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.46□□□□□ -0.57
CKS2P33552 FICD-205ENST00000552758 603 ntTSL 2 BASIC11.46□□□□□ -0.57
CKS2P33552 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC11.46□□□□□ -0.57
CKS2P33552 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 AL121956.5-201ENST00000625261 221 ntBASIC11.46□□□□□ -0.57
CKS2P33552 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.46□□□□□ -0.57
CKS2P33552 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
CKS2P33552 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.58
CKS2P33552 REXO1L1P-202ENST00000608646 1974 ntBASIC11.46□□□□□ -0.58
CKS2P33552 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.46□□□□□ -0.58
CKS2P33552 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
CKS2P33552 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
CKS2P33552 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CKS2P33552 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.46□□□□□ -0.58
CKS2P33552 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
CKS2P33552 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
CKS2P33552 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC11.46□□□□□ -0.58
CKS2P33552 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.45□□□□□ -0.58
CKS2P33552 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
CKS2P33552 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS2P33552 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS2P33552 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CKS2P33552 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CKS2P33552 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CKS2P33552 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS2P33552 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CKS2P33552 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS2P33552 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.45□□□□□ -0.58
CKS2P33552 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS2P33552 GPX1P2-201ENST00000429271 606 ntBASIC11.45□□□□□ -0.58
CKS2P33552 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.45□□□□□ -0.58
CKS2P33552 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.45□□□□□ -0.58
CKS2P33552 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CKS2P33552 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.45□□□□□ -0.58
CKS2P33552 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.45□□□□□ -0.58
CKS2P33552 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
CKS2P33552 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CKS2P33552 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 AL359881.3-201ENST00000602640 1721 ntBASIC11.45□□□□□ -0.58
CKS2P33552 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CKS2P33552 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 FAM212B-201ENST00000357260 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CKS2P33552 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.45□□□□□ -0.58
CKS2P33552 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CKS2P33552 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CKS2P33552 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC11.44□□□□□ -0.58
CKS2P33552 CSPG4P11-201ENST00000560634 4910 ntBASIC11.44□□□□□ -0.58
CKS2P33552 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms