Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.17■□□□□ 0.02
SDHBP21912 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.17■□□□□ 0.02
SDHBP21912 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SDHBP21912 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SDHBP21912 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 RPSAP31-201ENST00000416648 895 ntBASIC15.17■□□□□ 0.02
SDHBP21912 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.17■□□□□ 0.02
SDHBP21912 RN7SL181P-201ENST00000462921 277 ntBASIC15.17■□□□□ 0.02
SDHBP21912 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC15.17■□□□□ 0.02
SDHBP21912 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.17■□□□□ 0.02
SDHBP21912 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.17■□□□□ 0.02
SDHBP21912 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 AC007950.2-201ENST00000615045 2347 ntBASIC15.17■□□□□ 0.02
SDHBP21912 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.17■□□□□ 0.02
SDHBP21912 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.17■□□□□ 0.02
SDHBP21912 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SDHBP21912 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 DRD5P1-201ENST00000456605 1438 ntBASIC15.17■□□□□ 0.02
SDHBP21912 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SDHBP21912 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SDHBP21912 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHBP21912 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHBP21912 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHBP21912 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC15.16■□□□□ 0.02
SDHBP21912 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
SDHBP21912 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.16■□□□□ 0.02
SDHBP21912 AC125604.1-201ENST00000496255 707 ntBASIC15.16■□□□□ 0.02
SDHBP21912 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.16■□□□□ 0.02
SDHBP21912 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
SDHBP21912 AL645939.5-201ENST00000606834 243 ntBASIC15.16■□□□□ 0.02
SDHBP21912 AL353770.1-201ENST00000614915 403 ntBASIC15.16■□□□□ 0.02
SDHBP21912 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
SDHBP21912 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
SDHBP21912 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHBP21912 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHBP21912 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.16■□□□□ 0.02
SDHBP21912 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.16■□□□□ 0.02
SDHBP21912 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.16■□□□□ 0.02
SDHBP21912 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SDHBP21912 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHBP21912 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHBP21912 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.15■□□□□ 0.02
SDHBP21912 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.15■□□□□ 0.02
SDHBP21912 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.15■□□□□ 0.02
SDHBP21912 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHBP21912 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
SDHBP21912 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHBP21912 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SDHBP21912 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SDHBP21912 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SDHBP21912 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms