Protein–RNA interactions for Protein: P15374

UCHL3, Ubiquitin carboxyl-terminal hydrolase isozyme L3, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3P15374 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
UCHL3P15374 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UCHL3P15374 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UCHL3P15374 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
UCHL3P15374 AL359258.3-201ENST00000622910 2331 ntBASIC16.68■□□□□ 0.26
UCHL3P15374 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UCHL3P15374 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.68■□□□□ 0.26
UCHL3P15374 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.68■□□□□ 0.26
UCHL3P15374 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
UCHL3P15374 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
UCHL3P15374 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.67■□□□□ 0.26
UCHL3P15374 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 AC114501.2-201ENST00000439631 535 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.67■□□□□ 0.26
UCHL3P15374 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 AC092337.1-201ENST00000568699 1129 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.67■□□□□ 0.26
UCHL3P15374 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 AC004461.2-201ENST00000629517 803 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 AC007292.2-201ENST00000593524 1812 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
UCHL3P15374 AC068587.6-202ENST00000641839 5619 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UCHL3P15374 LINC00552-201ENST00000625151 2579 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 AC012508.2-201ENST00000567613 1472 ntBASIC16.67■□□□□ 0.26
UCHL3P15374 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UCHL3P15374 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.66■□□□□ 0.26
UCHL3P15374 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 MIR943-201ENST00000401286 94 ntBASIC16.66■□□□□ 0.26
UCHL3P15374 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 AC009477.1-201ENST00000452936 217 ntBASIC16.66■□□□□ 0.26
UCHL3P15374 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.66■□□□□ 0.26
UCHL3P15374 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.66■□□□□ 0.26
UCHL3P15374 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UCHL3P15374 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
UCHL3P15374 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.66■□□□□ 0.26
UCHL3P15374 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.65■□□□□ 0.26
UCHL3P15374 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.65■□□□□ 0.26
UCHL3P15374 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UCHL3P15374 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms