Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PCDHGA12O60330 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.39■□□□□ 0.05
PCDHGA12O60330 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AC008687.7-202ENST00000637404 953 ntBASIC15.38■□□□□ 0.05
PCDHGA12O60330 AC068587.10-201ENST00000641210 219 ntBASIC15.38■□□□□ 0.05
PCDHGA12O60330 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.38■□□□□ 0.05
PCDHGA12O60330 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PCDHGA12O60330 REXO1L8P-201ENST00000604378 1897 ntBASIC15.37■□□□□ 0.05
PCDHGA12O60330 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 KRT90P-201ENST00000549264 1064 ntBASIC15.37■□□□□ 0.05
PCDHGA12O60330 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PCDHGA12O60330 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PCDHGA12O60330 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms