Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 PCDHA3-202ENST00000532566 4594 ntBASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 KRT8P44-201ENST00000441609 1350 ntBASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PCDHGA11Q9Y5H2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 AC091951.1-201ENST00000512854 2465 ntBASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PCDHGA11Q9Y5H2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PCDHGA11Q9Y5H2 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 SDHAP3-202ENST00000515467 728 ntBASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AC027369.6-201ENST00000525520 931 ntBASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.08■□□□□ 0
PCDHGA11Q9Y5H2 AL158211.3-201ENST00000607385 239 ntBASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms