Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 BX640514.1-201ENST00000583223 1918 ntBASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
UBE2D4Q9Y2X8 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 AL355306.1-201ENST00000415580 579 ntBASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 GHSR-202ENST00000427970 912 ntBASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 FAAHP1-202ENST00000446499 1238 ntBASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 KRT18P2-201ENST00000447938 1258 ntBASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 RNA5SP419-201ENST00000515908 135 ntBASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
UBE2D4Q9Y2X8 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
UBE2D4Q9Y2X8 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms