Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.84■□□□□ 0.29
TRMT13Q9NUP7 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.83■□□□□ 0.29
TRMT13Q9NUP7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRMT13Q9NUP7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TRMT13Q9NUP7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TRMT13Q9NUP7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 RN7SL11P-201ENST00000471305 293 ntBASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SAMD11P1-201ENST00000571429 661 ntBASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 AC004466.1-201ENST00000599515 1080 ntBASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TRMT13Q9NUP7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 TUBBP5-203ENST00000508529 1334 ntBASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 AL354877.1-201ENST00000424412 413 ntBASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 AL133466.1-201ENST00000447582 150 ntBASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 MPRIPP1-201ENST00000452433 1089 ntBASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 MIR4722-201ENST00000578292 60 ntBASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TRMT13Q9NUP7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms