Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AC106730.1-201ENST00000566722 1090 ntBASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AC055717.3-201ENST00000622967 595 ntBASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CDC42SE2Q9NRR3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AL590627.1-203ENST00000421194 1026 ntBASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 GHSR-202ENST00000427970 912 ntBASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AL592309.1-201ENST00000443127 649 ntBASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 TIMM8BP1-201ENST00000452384 211 ntBASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC10.71□□□□□ -0.69
CDC42SE2Q9NRR3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
CDC42SE2Q9NRR3 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC10.71□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms