Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
HPS1Q92902 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HPS1Q92902 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.35□□□□□ -0.11
HPS1Q92902 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.34□□□□□ -0.11
HPS1Q92902 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 AL691447.1-201ENST00000419456 387 ntBASIC14.34□□□□□ -0.11
HPS1Q92902 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.34□□□□□ -0.11
HPS1Q92902 CNN2P11-201ENST00000429351 262 ntBASIC14.34□□□□□ -0.11
HPS1Q92902 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 AC074386.1-202ENST00000463561 864 ntBASIC14.34□□□□□ -0.11
HPS1Q92902 ALG1L5P-201ENST00000482043 771 ntBASIC14.34□□□□□ -0.11
HPS1Q92902 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 KRT19P2-202ENST00000557173 1012 ntBASIC14.34□□□□□ -0.11
HPS1Q92902 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 AL136370.1-201ENST00000608166 691 ntBASIC14.34□□□□□ -0.11
HPS1Q92902 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 BCAR1-209ENST00000546196 1340 ntBASIC14.34□□□□□ -0.11
HPS1Q92902 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
HPS1Q92902 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
HPS1Q92902 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HPS1Q92902 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
HPS1Q92902 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HPS1Q92902 AC087481.3-201ENST00000602886 1894 ntBASIC14.33□□□□□ -0.11
HPS1Q92902 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HPS1Q92902 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HPS1Q92902 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HPS1Q92902 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HPS1Q92902 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
HPS1Q92902 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.33□□□□□ -0.11
HPS1Q92902 MBLAC2-202ENST00000514906 1936 ntBASIC14.33□□□□□ -0.11
HPS1Q92902 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.33□□□□□ -0.12
HPS1Q92902 AL035696.2-201ENST00000407941 709 ntBASIC14.33□□□□□ -0.12
HPS1Q92902 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HPS1Q92902 CEND1P1-201ENST00000451006 455 ntBASIC14.33□□□□□ -0.12
HPS1Q92902 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.33□□□□□ -0.12
HPS1Q92902 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms