Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RAB3IL1Q8TBN0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 KRT8P37-201ENST00000451609 1420 ntBASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 HLA-A-201ENST00000376802 1334 ntBASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 AL022342.1-201ENST00000400363 863 ntBASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 KRT18P67-201ENST00000432816 1264 ntBASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 SPTSSB-204ENST00000617024 1292 ntBASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB3IL1Q8TBN0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 FAM197Y8-203ENST00000450145 560 ntBASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 AC105233.2-201ENST00000523697 349 ntBASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 UNC93B6-202ENST00000528242 690 ntBASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 AF228730.5-201ENST00000530288 346 ntBASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB3IL1Q8TBN0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 CICP14-201ENST00000629111 2732 ntBASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB3IL1Q8TBN0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms