Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD1LQ86WJ1 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 SLC9A7P1-202ENST00000556476 2239 ntBASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 FAM8A3P-201ENST00000427218 844 ntBASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 AC012508.2-201ENST00000567613 1472 ntBASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 LINC00552-201ENST00000625151 2579 ntBASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD1LQ86WJ1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 ZBTB45P1-201ENST00000452761 1456 ntBASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 SPDYE18-201ENST00000510091 1050 ntBASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 AL391069.4-201ENST00000609583 481 ntBASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD1LQ86WJ1 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 AC007292.2-201ENST00000593524 1812 ntBASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 CICP14-201ENST00000629111 2732 ntBASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 TIMM17BP1-201ENST00000545713 516 ntBASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 AL158212.4-201ENST00000624062 1286 ntBASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.11■□□□□ 0.65
CHD1LQ86WJ1 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms