Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNKSR3Q6P9H4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 RN7SKP175-201ENST00000408472 289 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 RPL17P11-201ENST00000417593 544 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PUDPP3-201ENST00000445368 636 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 AL353637.1-201ENST00000451571 732 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 MIR4783-201ENST00000580343 82 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 AC009955.4-201ENST00000597192 544 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 AP000346.4-201ENST00000614827 381 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 AC002472.3-201ENST00000640124 621 ntBASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CNKSR3Q6P9H4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 AC026434.2-201ENST00000506094 1078 ntBASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CNKSR3Q6P9H4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms