Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC00242Q5T6M2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 AC006504.5-208ENST00000588784 2401 ntBASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00242Q5T6M2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 MTHFR-210ENST00000641407 2387 ntBASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 HLA-H-201ENST00000383620 1096 ntBASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AC064836.3-201ENST00000607928 673 ntBASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00242Q5T6M2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00242Q5T6M2 AC027601.5-201ENST00000624065 2482 ntBASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms