Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMLP26374 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMLP26374 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 AC099063.4-201ENST00000641099 1602 ntBASIC18.65■□□□□ 0.58
CHMLP26374 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMLP26374 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMLP26374 GNAQP1-201ENST00000444815 1067 ntBASIC18.65■□□□□ 0.58
CHMLP26374 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMLP26374 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMLP26374 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMLP26374 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMLP26374 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMLP26374 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMLP26374 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMLP26374 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMLP26374 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.64■□□□□ 0.58
CHMLP26374 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHMLP26374 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
CHMLP26374 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMLP26374 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 DOC2GP-202ENST00000514950 1163 ntBASIC18.64■□□□□ 0.57
CHMLP26374 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 SAMD11P1-201ENST00000571429 661 ntBASIC18.64■□□□□ 0.57
CHMLP26374 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMLP26374 AL662799.1-202ENST00000614205 422 ntBASIC18.64■□□□□ 0.57
CHMLP26374 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMLP26374 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 DRD5P1-201ENST00000456605 1438 ntBASIC18.64■□□□□ 0.57
CHMLP26374 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMLP26374 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMLP26374 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMLP26374 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMLP26374 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMLP26374 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMLP26374 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMLP26374 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMLP26374 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 AL513477.1-201ENST00000602865 2407 ntBASIC18.63■□□□□ 0.57
CHMLP26374 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMLP26374 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMLP26374 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMLP26374 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMLP26374 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMLP26374 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CHMLP26374 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CHMLP26374 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMLP26374 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMLP26374 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHMLP26374 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMLP26374 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms