Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
P04436 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
P04436 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
P04436 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
P04436 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.15□□□□□ -0.14
P04436 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 BOLA2P3-201ENST00000404566 256 ntBASIC14.15□□□□□ -0.14
P04436 RPL5P21-201ENST00000404620 815 ntBASIC14.15□□□□□ -0.14
P04436 BAATP1-201ENST00000412284 1225 ntBASIC14.15□□□□□ -0.14
P04436 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.15□□□□□ -0.14
P04436 AC112492.5-201ENST00000421897 457 ntBASIC14.15□□□□□ -0.14
P04436 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.15□□□□□ -0.14
P04436 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
P04436 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.15□□□□□ -0.14
P04436 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.15□□□□□ -0.14
P04436 HILS1-202ENST00000545329 423 ntBASIC14.15□□□□□ -0.14
P04436 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.15□□□□□ -0.14
P04436 CLUHP6-201ENST00000580789 941 ntBASIC14.15□□□□□ -0.14
P04436 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.15□□□□□ -0.14
P04436 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 AL359881.2-201ENST00000602973 570 ntBASIC14.15□□□□□ -0.14
P04436 BX539320.1-201ENST00000623759 877 ntBASIC14.15□□□□□ -0.14
P04436 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 AC005252.2-201ENST00000624630 1141 ntBASIC14.15□□□□□ -0.14
P04436 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
P04436 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.15□□□□□ -0.14
P04436 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
P04436 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.15□□□□□ -0.14
P04436 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.15□□□□□ -0.14
P04436 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
P04436 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.15□□□□□ -0.14
P04436 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
P04436 AC134312.5-201ENST00000568031 1313 ntBASIC14.15□□□□□ -0.15
P04436 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
P04436 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.14□□□□□ -0.15
P04436 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.14□□□□□ -0.15
P04436 AC018665.1-201ENST00000622927 1362 ntBASIC14.14□□□□□ -0.15
P04436 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.14□□□□□ -0.15
P04436 ACKR1-201ENST00000368121 1240 ntBASIC14.14□□□□□ -0.15
P04436 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.14□□□□□ -0.15
P04436 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
P04436 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.14□□□□□ -0.15
P04436 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
P04436 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
P04436 ARSEP1-201ENST00000420443 635 ntBASIC14.14□□□□□ -0.15
P04436 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.14□□□□□ -0.15
P04436 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
P04436 ACA64.2-201ENST00000459014 129 ntBASIC14.14□□□□□ -0.15
P04436 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
P04436 GAPDHP40-201ENST00000505218 1006 ntBASIC14.14□□□□□ -0.15
P04436 USP32P1-208ENST00000506594 1164 ntBASIC14.14□□□□□ -0.15
P04436 KRT18P25-201ENST00000508931 1278 ntBASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms