Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ZBED1O96006 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.42■□□□□ 0.22
ZBED1O96006 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.42■□□□□ 0.22
ZBED1O96006 AC098850.1-201ENST00000419919 790 ntBASIC16.42■□□□□ 0.22
ZBED1O96006 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.42■□□□□ 0.22
ZBED1O96006 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.42■□□□□ 0.22
ZBED1O96006 FAM86LP-201ENST00000478302 853 ntBASIC16.42■□□□□ 0.22
ZBED1O96006 AC104596.2-201ENST00000512793 793 ntBASIC16.42■□□□□ 0.22
ZBED1O96006 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.42■□□□□ 0.22
ZBED1O96006 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.42■□□□□ 0.22
ZBED1O96006 MIR8072-201ENST00000614241 80 ntBASIC16.42■□□□□ 0.22
ZBED1O96006 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.42■□□□□ 0.22
ZBED1O96006 AC025048.6-201ENST00000634326 1161 ntBASIC16.42■□□□□ 0.22
ZBED1O96006 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.42■□□□□ 0.22
ZBED1O96006 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
ZBED1O96006 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.42■□□□□ 0.22
ZBED1O96006 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ZBED1O96006 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ZBED1O96006 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZBED1O96006 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.41■□□□□ 0.22
ZBED1O96006 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ZBED1O96006 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 MIR600HG-201ENST00000449175 5984 ntBASIC16.41■□□□□ 0.22
ZBED1O96006 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.41■□□□□ 0.22
ZBED1O96006 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.41■□□□□ 0.22
ZBED1O96006 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZBED1O96006 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.41■□□□□ 0.22
ZBED1O96006 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
ZBED1O96006 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.41■□□□□ 0.22
ZBED1O96006 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.41■□□□□ 0.22
ZBED1O96006 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.41■□□□□ 0.22
ZBED1O96006 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
ZBED1O96006 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.41■□□□□ 0.22
ZBED1O96006 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ZBED1O96006 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ZBED1O96006 AC105250.1-201ENST00000509378 2057 ntBASIC16.41■□□□□ 0.22
ZBED1O96006 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ZBED1O96006 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
ZBED1O96006 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 AP002414.2-201ENST00000591780 3365 ntBASIC16.4■□□□□ 0.22
ZBED1O96006 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZBED1O96006 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.4■□□□□ 0.22
ZBED1O96006 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.4■□□□□ 0.22
ZBED1O96006 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
ZBED1O96006 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.4■□□□□ 0.22
ZBED1O96006 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.4■□□□□ 0.22
ZBED1O96006 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
ZBED1O96006 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.4■□□□□ 0.22
ZBED1O96006 AC023824.1-201ENST00000562945 2975 ntBASIC16.4■□□□□ 0.22
ZBED1O96006 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ZBED1O96006 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ZBED1O96006 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
ZBED1O96006 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
ZBED1O96006 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.39■□□□□ 0.21
ZBED1O96006 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
ZBED1O96006 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
ZBED1O96006 DGCR5-201ENST00000399539 862 ntBASIC16.39■□□□□ 0.21
ZBED1O96006 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms