Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
MEIS3P1A6NDR6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ACE3P-201ENST00000423435 1973 ntBASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
MEIS3P1A6NDR6 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 PRSS29P-201ENST00000440800 595 ntBASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 AC092910.1-201ENST00000482027 1129 ntBASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 TP73-AS1-207ENST00000624167 988 ntBASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MEIS3P1A6NDR6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms