Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AC073592.4-201ENST00000623827 446 ntBASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
NKX6-2Q9C056 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
NKX6-2Q9C056 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AL137013.1-201ENST00000432946 1228 ntBASIC12.64□□□□□ -0.39
NKX6-2Q9C056 KRT8P26-201ENST00000534154 1276 ntBASIC12.64□□□□□ -0.39
NKX6-2Q9C056 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 LINC01238-205ENST00000567549 1107 ntBASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 TMEM191A-211ENST00000637163 1067 ntBASIC12.64□□□□□ -0.39
NKX6-2Q9C056 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
NKX6-2Q9C056 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 AC106818.1-201ENST00000623223 3242 ntBASIC12.63□□□□□ -0.39
NKX6-2Q9C056 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
NKX6-2Q9C056 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms