Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 RNMTL1P1-201ENST00000454103 560 ntBASIC16.4■□□□□ 0.22
RAD9AQ99638 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD9AQ99638 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.4■□□□□ 0.22
RAD9AQ99638 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.4■□□□□ 0.22
RAD9AQ99638 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAD9AQ99638 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD9AQ99638 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
RAD9AQ99638 AC018695.7-201ENST00000624587 2492 ntBASIC16.4■□□□□ 0.22
RAD9AQ99638 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD9AQ99638 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAD9AQ99638 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.4■□□□□ 0.22
RAD9AQ99638 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
RAD9AQ99638 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.39■□□□□ 0.22
RAD9AQ99638 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAD9AQ99638 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.39■□□□□ 0.21
RAD9AQ99638 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 NPPA-201ENST00000376476 728 ntTSL 3 BASIC16.39■□□□□ 0.21
RAD9AQ99638 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.39■□□□□ 0.21
RAD9AQ99638 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAD9AQ99638 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.39■□□□□ 0.21
RAD9AQ99638 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.39■□□□□ 0.21
RAD9AQ99638 AC006335.1-201ENST00000445200 547 ntBASIC16.39■□□□□ 0.21
RAD9AQ99638 AC104073.2-201ENST00000453737 312 ntBASIC16.39■□□□□ 0.21
RAD9AQ99638 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.39■□□□□ 0.21
RAD9AQ99638 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.39■□□□□ 0.21
RAD9AQ99638 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.39■□□□□ 0.21
RAD9AQ99638 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.39■□□□□ 0.21
RAD9AQ99638 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.39■□□□□ 0.21
RAD9AQ99638 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAD9AQ99638 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAD9AQ99638 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAD9AQ99638 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAD9AQ99638 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RAD9AQ99638 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.38■□□□□ 0.21
RAD9AQ99638 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.38■□□□□ 0.21
RAD9AQ99638 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.38■□□□□ 0.21
RAD9AQ99638 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.38■□□□□ 0.21
RAD9AQ99638 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.38■□□□□ 0.21
RAD9AQ99638 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.38■□□□□ 0.21
RAD9AQ99638 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.38■□□□□ 0.21
RAD9AQ99638 AC234782.1-201ENST00000451950 919 ntBASIC16.38■□□□□ 0.21
RAD9AQ99638 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.38■□□□□ 0.21
RAD9AQ99638 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.38■□□□□ 0.21
RAD9AQ99638 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.38■□□□□ 0.21
RAD9AQ99638 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.38■□□□□ 0.21
RAD9AQ99638 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RAD9AQ99638 AC138466.3-201ENST00000619983 221 ntBASIC16.38■□□□□ 0.21
RAD9AQ99638 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.38■□□□□ 0.21
RAD9AQ99638 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.38■□□□□ 0.21
RAD9AQ99638 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.38■□□□□ 0.21
RAD9AQ99638 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.38■□□□□ 0.21
RAD9AQ99638 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAD9AQ99638 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RAD9AQ99638 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.37■□□□□ 0.21
RAD9AQ99638 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 AC004899.1-201ENST00000424687 1714 ntBASIC16.37■□□□□ 0.21
RAD9AQ99638 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RAD9AQ99638 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms