Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 GOLGA2P9-201ENST00000596977 1937 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC12.66□□□□□ -0.38
RAB40CQ96S21 AC006504.5-208ENST00000588784 2401 ntBASIC12.66□□□□□ -0.38
RAB40CQ96S21 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
RAB40CQ96S21 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.65□□□□□ -0.38
RAB40CQ96S21 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 KRT8P37-201ENST00000451609 1420 ntBASIC12.65□□□□□ -0.38
RAB40CQ96S21 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 AC012640.2-201ENST00000561606 901 ntBASIC12.65□□□□□ -0.38
RAB40CQ96S21 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 AL161645.1-201ENST00000622716 1255 ntBASIC12.65□□□□□ -0.38
RAB40CQ96S21 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
RAB40CQ96S21 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.65□□□□□ -0.38
RAB40CQ96S21 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
RAB40CQ96S21 REXO1L2P-201ENST00000425429 2069 ntBASIC12.65□□□□□ -0.39
RAB40CQ96S21 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
RAB40CQ96S21 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 MRPL3P1-201ENST00000400109 1033 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.64□□□□□ -0.39
RAB40CQ96S21 VN2R19P-201ENST00000442399 1052 ntBASIC12.64□□□□□ -0.39
RAB40CQ96S21 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
RAB40CQ96S21 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms