Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 DNAJB3-201ENST00000446806 729 ntBASIC17.56■□□□□ 0.4
SMARCE1Q969G3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SMARCE1Q969G3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AC084364.1-201ENST00000551967 1556 ntBASIC17.55■□□□□ 0.4
SMARCE1Q969G3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 RPL5P21-201ENST00000404620 815 ntBASIC17.55■□□□□ 0.4
SMARCE1Q969G3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 RBPMS2P1-201ENST00000437762 623 ntBASIC17.55■□□□□ 0.4
SMARCE1Q969G3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 MIR4469-201ENST00000583919 79 ntBASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AL671883.3-201ENST00000603274 991 ntBASIC17.55■□□□□ 0.4
SMARCE1Q969G3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.55■□□□□ 0.4
SMARCE1Q969G3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 AC013726.1-201ENST00000563747 2285 ntBASIC17.55■□□□□ 0.4
SMARCE1Q969G3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SMARCE1Q969G3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.54■□□□□ 0.4
SMARCE1Q969G3 GPS2P2-201ENST00000430745 888 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms