Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 EEF1DP4-201ENST00000446006 880 ntBASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 HNRNPUP1-201ENST00000554987 333 ntBASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AC097359.3-201ENST00000603982 1210 ntBASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 AC004790.2-201ENST00000623588 572 ntBASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SMIM4Q8WVI0 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 KRT8P37-201ENST00000451609 1420 ntBASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 AC093827.2-201ENST00000512654 315 ntBASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 CICP8-201ENST00000455800 2813 ntBASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SMIM4Q8WVI0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SMIM4Q8WVI0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms