Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TREML4Q6UXN2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
TREML4Q6UXN2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.87□□□□□ -0.35
TREML4Q6UXN2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TREML4Q6UXN2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
TREML4Q6UXN2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AC087499.6-201ENST00000411576 835 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AC112492.5-201ENST00000421897 457 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 PTP4A2-201ENST00000457805 1032 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 HLA-V-204ENST00000476601 1289 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 PARP8-218ENST00000513738 596 ntTSL 4 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 FAM8A2P-201ENST00000528813 1142 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AC106886.1-201ENST00000568660 600 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 MIR4525-201ENST00000580000 75 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AC109809.1-201ENST00000619665 545 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 MTCO1P15-201ENST00000529569 1526 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 FLJ16779-201ENST00000612722 7638 ntBASIC12.86□□□□□ -0.35
TREML4Q6UXN2 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
TREML4Q6UXN2 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.85□□□□□ -0.35
TREML4Q6UXN2 DGCR5-201ENST00000399539 862 ntBASIC12.85□□□□□ -0.35
TREML4Q6UXN2 AC079776.1-201ENST00000401540 1152 ntBASIC12.85□□□□□ -0.35
TREML4Q6UXN2 HAUS4P1-201ENST00000406739 1145 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms