Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.58□□□□□ -0.4
CX3CL1P78423 AC106028.4-201ENST00000614509 607 ntBASIC12.58□□□□□ -0.4
CX3CL1P78423 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 AC092127.1-201ENST00000567093 3455 ntBASIC12.58□□□□□ -0.4
CX3CL1P78423 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CX3CL1P78423 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CX3CL1P78423 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.57□□□□□ -0.4
CX3CL1P78423 AC136604.1-201ENST00000418535 575 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 PMS2P2-201ENST00000425039 1128 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 LY6E-204ENST00000519546 971 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 IGHV3-42-201ENST00000520410 361 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC12.57□□□□□ -0.4
CX3CL1P78423 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.57□□□□□ -0.4
CX3CL1P78423 AC097359.3-201ENST00000603982 1210 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 ILF3-AS1-201ENST00000591501 1983 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 AL359258.3-201ENST00000622910 2331 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 AC104581.4-201ENST00000623126 3052 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 CICP24-201ENST00000605464 2705 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
CX3CL1P78423 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CX3CL1P78423 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.57□□□□□ -0.4
CX3CL1P78423 CICP4-201ENST00000447359 2812 ntBASIC12.57□□□□□ -0.4
CX3CL1P78423 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CL1P78423 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CL1P78423 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.56□□□□□ -0.4
CX3CL1P78423 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CX3CL1P78423 AL109954.1-202ENST00000564051 2148 ntBASIC12.56□□□□□ -0.4
CX3CL1P78423 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
CX3CL1P78423 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CL1P78423 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CL1P78423 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.56□□□□□ -0.4
CX3CL1P78423 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CL1P78423 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CL1P78423 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
CX3CL1P78423 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
CX3CL1P78423 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CL1P78423 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
CX3CL1P78423 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.56□□□□□ -0.4
CX3CL1P78423 MYO15B-237ENST00000642007 4893 ntBASIC12.56□□□□□ -0.4
CX3CL1P78423 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms