Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.13■□□□□ 0.01
CLCN2P51788 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN2P51788 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN2P51788 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN2P51788 DUX4L27-201ENST00000554796 1261 ntBASIC15.13■□□□□ 0.01
CLCN2P51788 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN2P51788 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN2P51788 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.13■□□□□ 0.01
CLCN2P51788 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CLCN2P51788 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.13■□□□□ 0.01
CLCN2P51788 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.13■□□□□ 0.01
CLCN2P51788 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.13■□□□□ 0.01
CLCN2P51788 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CLCN2P51788 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
CLCN2P51788 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CLCN2P51788 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 AP003680.1-201ENST00000598970 3660 ntBASIC15.12■□□□□ 0.01
CLCN2P51788 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLCN2P51788 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.12■□□□□ 0.01
CLCN2P51788 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 AC005840.4-201ENST00000541242 2494 ntBASIC15.12■□□□□ 0.01
CLCN2P51788 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CLCN2P51788 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CLCN2P51788 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CLCN2P51788 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CLCN2P51788 CICP20-201ENST00000443330 2801 ntBASIC15.12■□□□□ 0.01
CLCN2P51788 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 AC092127.1-201ENST00000567093 3455 ntBASIC15.11■□□□□ 0.01
CLCN2P51788 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
CLCN2P51788 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CLCN2P51788 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CLCN2P51788 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.11■□□□□ 0.01
CLCN2P51788 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
CLCN2P51788 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CLCN2P51788 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CLCN2P51788 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.11■□□□□ 0.01
CLCN2P51788 HMGN1P19-201ENST00000436976 333 ntBASIC15.11■□□□□ 0.01
CLCN2P51788 IGHV3-42-201ENST00000520410 361 ntBASIC15.11■□□□□ 0.01
CLCN2P51788 AC061975.2-201ENST00000581722 295 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms