Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
PDGFAP04085 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
PDGFAP04085 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
PDGFAP04085 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.61□□□□□ -0.07
PDGFAP04085 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 AL691432.1-201ENST00000596308 1422 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 AC068587.6-202ENST00000641839 5619 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 BRWD1P1-201ENST00000401091 371 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 BCYRN1-201ENST00000418539 200 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.6□□□□□ -0.07
PDGFAP04085 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.6□□□□□ -0.07
PDGFAP04085 AC108725.1-201ENST00000495472 409 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.6□□□□□ -0.07
PDGFAP04085 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.6□□□□□ -0.07
PDGFAP04085 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.6□□□□□ -0.07
PDGFAP04085 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.6□□□□□ -0.07
PDGFAP04085 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.6□□□□□ -0.07
PDGFAP04085 LINC01144-201ENST00000626198 1710 ntBASIC14.6□□□□□ -0.07
PDGFAP04085 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
PDGFAP04085 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PDGFAP04085 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PDGFAP04085 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PDGFAP04085 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PDGFAP04085 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
PDGFAP04085 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.59□□□□□ -0.07
PDGFAP04085 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 GGT3P-204ENST00000453783 1664 ntBASIC14.59□□□□□ -0.07
PDGFAP04085 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.59□□□□□ -0.07
PDGFAP04085 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.59□□□□□ -0.07
PDGFAP04085 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC14.59□□□□□ -0.07
PDGFAP04085 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.59□□□□□ -0.07
PDGFAP04085 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.59□□□□□ -0.07
PDGFAP04085 RNA5SP412-201ENST00000516234 123 ntBASIC14.59□□□□□ -0.07
PDGFAP04085 AP001889.1-201ENST00000525414 633 ntBASIC14.59□□□□□ -0.07
PDGFAP04085 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.59□□□□□ -0.07
PDGFAP04085 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.59□□□□□ -0.07
PDGFAP04085 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC14.59□□□□□ -0.07
PDGFAP04085 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
PDGFAP04085 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.59□□□□□ -0.07
PDGFAP04085 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.59□□□□□ -0.07
PDGFAP04085 AC244093.1-201ENST00000610837 814 ntBASIC14.59□□□□□ -0.07
PDGFAP04085 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.59□□□□□ -0.07
PDGFAP04085 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.59□□□□□ -0.07
PDGFAP04085 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.59□□□□□ -0.07
PDGFAP04085 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PDGFAP04085 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
PDGFAP04085 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PDGFAP04085 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms