Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TMEM56-RWDD3S4R434 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.97■□□□□ 0.63
TMEM56-RWDD3S4R434 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM56-RWDD3S4R434 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.97■□□□□ 0.63
TMEM56-RWDD3S4R434 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM56-RWDD3S4R434 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM56-RWDD3S4R434 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TMEM56-RWDD3S4R434 SMPD5-203ENST00000639008 1464 ntBASIC18.97■□□□□ 0.63
TMEM56-RWDD3S4R434 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TMEM56-RWDD3S4R434 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 RPS2P35-201ENST00000443417 897 ntBASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TMEM56-RWDD3S4R434 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 FOXO3B-201ENST00000395675 1928 ntBASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.94■□□□□ 0.62
TMEM56-RWDD3S4R434 CLDN5-201ENST00000403084 2357 ntBASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM56-RWDD3S4R434 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TMEM56-RWDD3S4R434 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 AC060814.1-201ENST00000554326 538 ntBASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TMEM56-RWDD3S4R434 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 MIR3648-2-201ENST00000581792 180 ntBASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 MIR3648-1-201ENST00000615959 180 ntBASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM56-RWDD3S4R434 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms