Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SPCS1Q9Y6A9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SPCS1Q9Y6A9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SPCS1Q9Y6A9 AC018358.1-201ENST00000631079 1402 ntBASIC16.03■□□□□ 0.16
SPCS1Q9Y6A9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPCS1Q9Y6A9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPCS1Q9Y6A9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPCS1Q9Y6A9 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPCS1Q9Y6A9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SPCS1Q9Y6A9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SPCS1Q9Y6A9 AP003733.4-201ENST00000623785 1697 ntBASIC16.02■□□□□ 0.16
SPCS1Q9Y6A9 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.02■□□□□ 0.16
SPCS1Q9Y6A9 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SPCS1Q9Y6A9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPCS1Q9Y6A9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPCS1Q9Y6A9 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPCS1Q9Y6A9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.02■□□□□ 0.15
SPCS1Q9Y6A9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPCS1Q9Y6A9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 AC141586.4-201ENST00000624558 1573 ntBASIC16■□□□□ 0.15
SPCS1Q9Y6A9 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPCS1Q9Y6A9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SPCS1Q9Y6A9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.98■□□□□ 0.15
SPCS1Q9Y6A9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 AF106564.1-201ENST00000607058 2553 ntBASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.97■□□□□ 0.15
SPCS1Q9Y6A9 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms