Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHB1Q9Y5F3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 AL139125.2-201ENST00000623134 1869 ntBASIC23.23■■□□□ 1.31
PCDHB1Q9Y5F3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHB1Q9Y5F3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 BX664725.1-201ENST00000438252 379 ntBASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 UNC93B8-201ENST00000511903 705 ntBASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.21■■□□□ 1.31
PCDHB1Q9Y5F3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB1Q9Y5F3 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB1Q9Y5F3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDHB1Q9Y5F3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHB1Q9Y5F3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHB1Q9Y5F3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.2■■□□□ 1.3
PCDHB1Q9Y5F3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHB1Q9Y5F3 AC135731.1-201ENST00000569415 2548 ntBASIC23.18■■□□□ 1.3
PCDHB1Q9Y5F3 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB1Q9Y5F3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.18■■□□□ 1.3
PCDHB1Q9Y5F3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB1Q9Y5F3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHB1Q9Y5F3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB1Q9Y5F3 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB1Q9Y5F3 KRT16P3-201ENST00000439127 1283 ntBASIC23.17■■□□□ 1.3
PCDHB1Q9Y5F3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.17■■□□□ 1.3
PCDHB1Q9Y5F3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHB1Q9Y5F3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHB1Q9Y5F3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHB1Q9Y5F3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB1Q9Y5F3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHB1Q9Y5F3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHB1Q9Y5F3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHB1Q9Y5F3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHB1Q9Y5F3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHB1Q9Y5F3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
PCDHB1Q9Y5F3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
PCDHB1Q9Y5F3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB1Q9Y5F3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB1Q9Y5F3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
PCDHB1Q9Y5F3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB1Q9Y5F3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHB1Q9Y5F3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHB1Q9Y5F3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHB1Q9Y5F3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 AC022616.5-201ENST00000518796 181 ntBASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.13■■□□□ 1.29
PCDHB1Q9Y5F3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHB1Q9Y5F3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms