Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NELFAQ9H3P2 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.64■□□□□ 0.89
NELFAQ9H3P2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NELFAQ9H3P2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFAQ9H3P2 YBX1P4-201ENST00000392794 808 ntBASIC20.63■□□□□ 0.89
NELFAQ9H3P2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.63■□□□□ 0.89
NELFAQ9H3P2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NELFAQ9H3P2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NELFAQ9H3P2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NELFAQ9H3P2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NELFAQ9H3P2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.62■□□□□ 0.89
NELFAQ9H3P2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.62■□□□□ 0.89
NELFAQ9H3P2 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NELFAQ9H3P2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.62■□□□□ 0.89
NELFAQ9H3P2 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NELFAQ9H3P2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NELFAQ9H3P2 AC093323.1-202ENST00000635031 2045 ntBASIC20.6■□□□□ 0.89
NELFAQ9H3P2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.59■□□□□ 0.89
NELFAQ9H3P2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFAQ9H3P2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
NELFAQ9H3P2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.59■□□□□ 0.89
NELFAQ9H3P2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
NELFAQ9H3P2 LINC01124-201ENST00000409786 2117 ntBASIC20.59■□□□□ 0.89
NELFAQ9H3P2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
NELFAQ9H3P2 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.58■□□□□ 0.89
NELFAQ9H3P2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.58■□□□□ 0.89
NELFAQ9H3P2 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NELFAQ9H3P2 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
NELFAQ9H3P2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 AC120024.1-201ENST00000562672 995 ntBASIC20.57■□□□□ 0.88
NELFAQ9H3P2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
NELFAQ9H3P2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NELFAQ9H3P2 KRT18P24-201ENST00000344739 1156 ntBASIC20.56■□□□□ 0.88
NELFAQ9H3P2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.56■□□□□ 0.88
NELFAQ9H3P2 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NELFAQ9H3P2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NELFAQ9H3P2 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.56■□□□□ 0.88
NELFAQ9H3P2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.56■□□□□ 0.88
NELFAQ9H3P2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
NELFAQ9H3P2 AC090877.2-201ENST00000558441 1738 ntBASIC20.56■□□□□ 0.88
NELFAQ9H3P2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 AL451085.2-201ENST00000605085 799 ntBASIC20.55■□□□□ 0.88
NELFAQ9H3P2 AC011551.1-201ENST00000614101 683 ntBASIC20.55■□□□□ 0.88
NELFAQ9H3P2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
NELFAQ9H3P2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NELFAQ9H3P2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
NELFAQ9H3P2 AL031848.2-201ENST00000607670 837 ntBASIC20.54■□□□□ 0.88
NELFAQ9H3P2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
NELFAQ9H3P2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.54■□□□□ 0.88
NELFAQ9H3P2 AC141586.4-201ENST00000624558 1573 ntBASIC20.54■□□□□ 0.88
NELFAQ9H3P2 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
NELFAQ9H3P2 LINC00543-201ENST00000567234 1845 ntBASIC20.53■□□□□ 0.88
NELFAQ9H3P2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
NELFAQ9H3P2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NELFAQ9H3P2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.53■□□□□ 0.88
NELFAQ9H3P2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFAQ9H3P2 HLA-L-211ENST00000482052 1765 ntBASIC20.53■□□□□ 0.88
NELFAQ9H3P2 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NELFAQ9H3P2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFAQ9H3P2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NELFAQ9H3P2 THA1P-201ENST00000590384 1145 ntBASIC20.52■□□□□ 0.88
NELFAQ9H3P2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms