Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM2Q9C040 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.29■■□□□ 1
TRIM2Q9C040 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM2Q9C040 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRIM2Q9C040 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM2Q9C040 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM2Q9C040 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.28■■□□□ 1
TRIM2Q9C040 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM2Q9C040 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM2Q9C040 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.27■■□□□ 1
TRIM2Q9C040 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.27■■□□□ 1
TRIM2Q9C040 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM2Q9C040 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.27■■□□□ 1
TRIM2Q9C040 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.27■■□□□ 1
TRIM2Q9C040 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
TRIM2Q9C040 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.27■■□□□ 1
TRIM2Q9C040 AC090877.2-201ENST00000558441 1738 ntBASIC21.26■□□□□ 0.99
TRIM2Q9C040 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM2Q9C040 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM2Q9C040 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM2Q9C040 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM2Q9C040 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM2Q9C040 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
TRIM2Q9C040 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM2Q9C040 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM2Q9C040 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM2Q9C040 LONRF2P2-201ENST00000439212 571 ntBASIC21.25■□□□□ 0.99
TRIM2Q9C040 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM2Q9C040 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM2Q9C040 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM2Q9C040 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM2Q9C040 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM2Q9C040 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.24■□□□□ 0.99
TRIM2Q9C040 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM2Q9C040 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM2Q9C040 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM2Q9C040 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM2Q9C040 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM2Q9C040 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM2Q9C040 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM2Q9C040 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.23■□□□□ 0.99
TRIM2Q9C040 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.23■□□□□ 0.99
TRIM2Q9C040 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM2Q9C040 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TRIM2Q9C040 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM2Q9C040 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM2Q9C040 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRIM2Q9C040 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM2Q9C040 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TRIM2Q9C040 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM2Q9C040 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.22■□□□□ 0.99
TRIM2Q9C040 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM2Q9C040 DUX4L18-201ENST00000553347 1267 ntBASIC21.22■□□□□ 0.99
TRIM2Q9C040 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM2Q9C040 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM2Q9C040 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRIM2Q9C040 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM2Q9C040 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM2Q9C040 AC004812.2-201ENST00000611079 2094 ntBASIC21.21■□□□□ 0.99
TRIM2Q9C040 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM2Q9C040 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM2Q9C040 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM2Q9C040 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM2Q9C040 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.21■□□□□ 0.99
TRIM2Q9C040 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.21■□□□□ 0.99
TRIM2Q9C040 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRIM2Q9C040 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM2Q9C040 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM2Q9C040 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
TRIM2Q9C040 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.2■□□□□ 0.98
TRIM2Q9C040 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM2Q9C040 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.2■□□□□ 0.98
TRIM2Q9C040 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.2■□□□□ 0.98
TRIM2Q9C040 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRIM2Q9C040 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM2Q9C040 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM2Q9C040 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
TRIM2Q9C040 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM2Q9C040 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM2Q9C040 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM2Q9C040 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM2Q9C040 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
TRIM2Q9C040 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TRIM2Q9C040 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM2Q9C040 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.19■□□□□ 0.98
TRIM2Q9C040 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.19■□□□□ 0.98
TRIM2Q9C040 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.18■□□□□ 0.98
TRIM2Q9C040 AC139795.1-202ENST00000500444 432 ntBASIC21.18■□□□□ 0.98
TRIM2Q9C040 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.18■□□□□ 0.98
TRIM2Q9C040 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.18■□□□□ 0.98
TRIM2Q9C040 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TRIM2Q9C040 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms