Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BBS1Q8NFJ9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
BBS1Q8NFJ9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
BBS1Q8NFJ9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
BBS1Q8NFJ9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BBS1Q8NFJ9 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
BBS1Q8NFJ9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
BBS1Q8NFJ9 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.85■□□□□ 0.93
BBS1Q8NFJ9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.85■□□□□ 0.93
BBS1Q8NFJ9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS1Q8NFJ9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
BBS1Q8NFJ9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 RAP2CP1-202ENST00000605179 643 ntBASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
BBS1Q8NFJ9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS1Q8NFJ9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.83■□□□□ 0.93
BBS1Q8NFJ9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS1Q8NFJ9 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
BBS1Q8NFJ9 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.83■□□□□ 0.93
BBS1Q8NFJ9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BBS1Q8NFJ9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
BBS1Q8NFJ9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
BBS1Q8NFJ9 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.81■□□□□ 0.92
BBS1Q8NFJ9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.81■□□□□ 0.92
BBS1Q8NFJ9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.81■□□□□ 0.92
BBS1Q8NFJ9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
BBS1Q8NFJ9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.81■□□□□ 0.92
BBS1Q8NFJ9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.81■□□□□ 0.92
BBS1Q8NFJ9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BBS1Q8NFJ9 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.79■□□□□ 0.92
BBS1Q8NFJ9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS1Q8NFJ9 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.79■□□□□ 0.92
BBS1Q8NFJ9 AC026202.3-201ENST00000600805 1127 ntBASIC20.79■□□□□ 0.92
BBS1Q8NFJ9 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS1Q8NFJ9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BBS1Q8NFJ9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BBS1Q8NFJ9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
BBS1Q8NFJ9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.78■□□□□ 0.92
BBS1Q8NFJ9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
BBS1Q8NFJ9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.78■□□□□ 0.92
BBS1Q8NFJ9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.77■□□□□ 0.92
BBS1Q8NFJ9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS1Q8NFJ9 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BBS1Q8NFJ9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
BBS1Q8NFJ9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
BBS1Q8NFJ9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
BBS1Q8NFJ9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.77■□□□□ 0.91
BBS1Q8NFJ9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
BBS1Q8NFJ9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
BBS1Q8NFJ9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms