Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LRRC28Q86X40 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.52■□□□□ 0.88
LRRC28Q86X40 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC28Q86X40 AC009831.1-201ENST00000580420 1582 ntBASIC20.52■□□□□ 0.88
LRRC28Q86X40 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.52■□□□□ 0.88
LRRC28Q86X40 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC28Q86X40 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC28Q86X40 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
LRRC28Q86X40 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
LRRC28Q86X40 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC28Q86X40 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LRRC28Q86X40 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LRRC28Q86X40 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
LRRC28Q86X40 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LRRC28Q86X40 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 KRT18P60-201ENST00000312876 1297 ntBASIC20.5■□□□□ 0.87
LRRC28Q86X40 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.5■□□□□ 0.87
LRRC28Q86X40 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 AC012354.3-201ENST00000623734 483 ntBASIC20.5■□□□□ 0.87
LRRC28Q86X40 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LRRC28Q86X40 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC28Q86X40 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LRRC28Q86X40 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC28Q86X40 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LRRC28Q86X40 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.49■□□□□ 0.87
LRRC28Q86X40 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC28Q86X40 RAP2CP1-202ENST00000605179 643 ntBASIC20.49■□□□□ 0.87
LRRC28Q86X40 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
LRRC28Q86X40 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LRRC28Q86X40 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC28Q86X40 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LRRC28Q86X40 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC28Q86X40 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.48■□□□□ 0.87
LRRC28Q86X40 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC28Q86X40 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC28Q86X40 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LRRC28Q86X40 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.48■□□□□ 0.87
LRRC28Q86X40 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LRRC28Q86X40 AL117328.2-201ENST00000624617 1940 ntBASIC20.47■□□□□ 0.87
LRRC28Q86X40 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LRRC28Q86X40 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC28Q86X40 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC28Q86X40 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.47■□□□□ 0.87
LRRC28Q86X40 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC28Q86X40 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC28Q86X40 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC28Q86X40 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.47■□□□□ 0.87
LRRC28Q86X40 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.47■□□□□ 0.87
LRRC28Q86X40 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC28Q86X40 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LRRC28Q86X40 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC28Q86X40 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
LRRC28Q86X40 C9orf163-202ENST00000624034 2573 ntBASIC20.46■□□□□ 0.87
LRRC28Q86X40 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRRC28Q86X40 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC28Q86X40 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC28Q86X40 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LRRC28Q86X40 AL592293.1-201ENST00000502889 1188 ntBASIC20.46■□□□□ 0.87
LRRC28Q86X40 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LRRC28Q86X40 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.46■□□□□ 0.87
LRRC28Q86X40 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.46■□□□□ 0.87
LRRC28Q86X40 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC28Q86X40 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC28Q86X40 ABCB10P4-201ENST00000566803 2184 ntBASIC20.45■□□□□ 0.86
LRRC28Q86X40 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC28Q86X40 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC28Q86X40 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.45■□□□□ 0.86
LRRC28Q86X40 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LRRC28Q86X40 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
LRRC28Q86X40 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LRRC28Q86X40 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms