Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
LYSMD3Q7Z3D4 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LYSMD3Q7Z3D4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
LYSMD3Q7Z3D4 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
LYSMD3Q7Z3D4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.33■■□□□ 1.32
LYSMD3Q7Z3D4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LYSMD3Q7Z3D4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
LYSMD3Q7Z3D4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.32■■□□□ 1.32
LYSMD3Q7Z3D4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LYSMD3Q7Z3D4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
LYSMD3Q7Z3D4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LYSMD3Q7Z3D4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LYSMD3Q7Z3D4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
LYSMD3Q7Z3D4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
LYSMD3Q7Z3D4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
LYSMD3Q7Z3D4 HLA-L-211ENST00000482052 1765 ntBASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 AL035685.1-201ENST00000636663 812 ntBASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LYSMD3Q7Z3D4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 AC009299.2-201ENST00000482477 511 ntBASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.28■■□□□ 1.32
LYSMD3Q7Z3D4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
LYSMD3Q7Z3D4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.27■■□□□ 1.32
LYSMD3Q7Z3D4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LYSMD3Q7Z3D4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LYSMD3Q7Z3D4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
LYSMD3Q7Z3D4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LYSMD3Q7Z3D4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 AF131216.4-201ENST00000638924 1588 ntBASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.26■■□□□ 1.31
LYSMD3Q7Z3D4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 AL139125.2-201ENST00000623134 1869 ntBASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
LYSMD3Q7Z3D4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.24■■□□□ 1.31
LYSMD3Q7Z3D4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
LYSMD3Q7Z3D4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.24■■□□□ 1.31
LYSMD3Q7Z3D4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.24■■□□□ 1.31
LYSMD3Q7Z3D4 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.24■■□□□ 1.31
LYSMD3Q7Z3D4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.24■■□□□ 1.31
LYSMD3Q7Z3D4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
LYSMD3Q7Z3D4 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
LYSMD3Q7Z3D4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.23■■□□□ 1.31
LYSMD3Q7Z3D4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.23■■□□□ 1.31
LYSMD3Q7Z3D4 AC137630.3-201ENST00000607245 391 ntBASIC23.23■■□□□ 1.31
LYSMD3Q7Z3D4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
LYSMD3Q7Z3D4 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
LYSMD3Q7Z3D4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.23■■□□□ 1.31
LYSMD3Q7Z3D4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.22■■□□□ 1.31
LYSMD3Q7Z3D4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms