Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 MIR935-201ENST00000401179 91 ntBASIC26.93■■□□□ 1.9
KRT40Q6A162 AC103834.1-201ENST00000520383 144 ntBASIC26.93■■□□□ 1.9
KRT40Q6A162 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
KRT40Q6A162 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.93■■□□□ 1.9
KRT40Q6A162 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT40Q6A162 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT40Q6A162 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT40Q6A162 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
KRT40Q6A162 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.92■■□□□ 1.9
KRT40Q6A162 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
KRT40Q6A162 GUSBP5-201ENST00000418136 578 ntBASIC26.92■■□□□ 1.9
KRT40Q6A162 AC019171.1-201ENST00000601251 1056 ntBASIC26.92■■□□□ 1.9
KRT40Q6A162 AC090877.2-201ENST00000558441 1738 ntBASIC26.92■■□□□ 1.9
KRT40Q6A162 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
KRT40Q6A162 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRT40Q6A162 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC26.91■■□□□ 1.9
KRT40Q6A162 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRT40Q6A162 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
KRT40Q6A162 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
KRT40Q6A162 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
KRT40Q6A162 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.91■■□□□ 1.9
KRT40Q6A162 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.91■■□□□ 1.9
KRT40Q6A162 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRT40Q6A162 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.9■■□□□ 1.9
KRT40Q6A162 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.9■■□□□ 1.9
KRT40Q6A162 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 PVT1_1.1-201ENST00000615125 194 ntBASIC26.9■■□□□ 1.9
KRT40Q6A162 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
KRT40Q6A162 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
KRT40Q6A162 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT40Q6A162 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.89■■□□□ 1.9
KRT40Q6A162 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT40Q6A162 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
KRT40Q6A162 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KRT40Q6A162 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
KRT40Q6A162 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KRT40Q6A162 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
KRT40Q6A162 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.88■■□□□ 1.89
KRT40Q6A162 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.88■■□□□ 1.89
KRT40Q6A162 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
KRT40Q6A162 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
KRT40Q6A162 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KRT40Q6A162 AC141586.4-201ENST00000624558 1573 ntBASIC26.88■■□□□ 1.89
KRT40Q6A162 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
KRT40Q6A162 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
KRT40Q6A162 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.88■■□□□ 1.89
KRT40Q6A162 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.87■■□□□ 1.89
KRT40Q6A162 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
KRT40Q6A162 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.87■■□□□ 1.89
KRT40Q6A162 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.87■■□□□ 1.89
KRT40Q6A162 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.86■■□□□ 1.89
KRT40Q6A162 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.86■■□□□ 1.89
KRT40Q6A162 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
KRT40Q6A162 YBX1P4-201ENST00000392794 808 ntBASIC26.85■■□□□ 1.89
KRT40Q6A162 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.85■■□□□ 1.89
KRT40Q6A162 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KRT40Q6A162 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
KRT40Q6A162 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
KRT40Q6A162 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
KRT40Q6A162 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.85■■□□□ 1.89
KRT40Q6A162 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
KRT40Q6A162 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KRT40Q6A162 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KRT40Q6A162 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KRT40Q6A162 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
KRT40Q6A162 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
KRT40Q6A162 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.84■■□□□ 1.89
KRT40Q6A162 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KRT40Q6A162 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
KRT40Q6A162 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
KRT40Q6A162 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
KRT40Q6A162 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
KRT40Q6A162 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC26.83■■□□□ 1.89
KRT40Q6A162 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
KRT40Q6A162 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
KRT40Q6A162 AC074183.2-201ENST00000623112 922 ntBASIC26.83■■□□□ 1.89
KRT40Q6A162 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.83■■□□□ 1.89
KRT40Q6A162 THRA-202ENST00000394121 2260 ntTSL 2 BASIC26.83■■□□□ 1.89
KRT40Q6A162 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
KRT40Q6A162 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
KRT40Q6A162 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.82■■□□□ 1.88
KRT40Q6A162 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
KRT40Q6A162 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
KRT40Q6A162 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.81■■□□□ 1.88
KRT40Q6A162 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
KRT40Q6A162 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
KRT40Q6A162 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.81■■□□□ 1.88
KRT40Q6A162 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.81■■□□□ 1.88
KRT40Q6A162 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
KRT40Q6A162 AC004812.2-201ENST00000611079 2094 ntBASIC26.81■■□□□ 1.88
KRT40Q6A162 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
KRT40Q6A162 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
KRT40Q6A162 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
KRT40Q6A162 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.8■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms