Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01554Q52M75 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01554Q52M75 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01554Q52M75 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01554Q52M75 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
LINC01554Q52M75 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
LINC01554Q52M75 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01554Q52M75 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01554Q52M75 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01554Q52M75 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC11.59□□□□□ -0.55
LINC01554Q52M75 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
LINC01554Q52M75 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC11.59□□□□□ -0.55
LINC01554Q52M75 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.55
LINC01554Q52M75 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
LINC01554Q52M75 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 RARRES2P7-201ENST00000567349 469 ntBASIC11.58□□□□□ -0.56
LINC01554Q52M75 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
LINC01554Q52M75 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
LINC01554Q52M75 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
LINC01554Q52M75 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
LINC01554Q52M75 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC01554Q52M75 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC11.56□□□□□ -0.56
LINC01554Q52M75 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC11.56□□□□□ -0.56
LINC01554Q52M75 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LINC01554Q52M75 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 BX255925.1-201ENST00000566954 1854 ntBASIC11.55□□□□□ -0.56
LINC01554Q52M75 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LINC01554Q52M75 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LINC01554Q52M75 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms