Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SNAI3Q3KNW1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
SNAI3Q3KNW1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAI3Q3KNW1 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SNAI3Q3KNW1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.15■□□□□ 0.82
SNAI3Q3KNW1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.15■□□□□ 0.82
SNAI3Q3KNW1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SNAI3Q3KNW1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 AC019171.1-201ENST00000601251 1056 ntBASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SNAI3Q3KNW1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 AC012354.3-201ENST00000623734 483 ntBASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SNAI3Q3KNW1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNAI3Q3KNW1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 AC010980.1-201ENST00000587192 1142 ntBASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.11■□□□□ 0.81
SNAI3Q3KNW1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 ABCB10P4-201ENST00000566803 2184 ntBASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 AL033527.3-201ENST00000566366 1196 ntBASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNAI3Q3KNW1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
SNAI3Q3KNW1 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.08■□□□□ 0.81
SNAI3Q3KNW1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNAI3Q3KNW1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.08■□□□□ 0.8
SNAI3Q3KNW1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNAI3Q3KNW1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNAI3Q3KNW1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SNAI3Q3KNW1 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAI3Q3KNW1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNAI3Q3KNW1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.07■□□□□ 0.8
SNAI3Q3KNW1 AC022616.5-201ENST00000518796 181 ntBASIC20.07■□□□□ 0.8
SNAI3Q3KNW1 AC074183.2-201ENST00000623112 922 ntBASIC20.07■□□□□ 0.8
SNAI3Q3KNW1 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.07■□□□□ 0.8
SNAI3Q3KNW1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 AC011551.1-201ENST00000614101 683 ntBASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SNAI3Q3KNW1 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SNAI3Q3KNW1 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms