Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TBC1D28Q2M2D7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D28Q2M2D7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D28Q2M2D7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.16■□□□□ 0.82
TBC1D28Q2M2D7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D28Q2M2D7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D28Q2M2D7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D28Q2M2D7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TBC1D28Q2M2D7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
TBC1D28Q2M2D7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D28Q2M2D7 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
TBC1D28Q2M2D7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.15■□□□□ 0.82
TBC1D28Q2M2D7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TBC1D28Q2M2D7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
TBC1D28Q2M2D7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TBC1D28Q2M2D7 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 BX664725.1-201ENST00000438252 379 ntBASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 AL451085.2-201ENST00000605085 799 ntBASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TBC1D28Q2M2D7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 HLA-L-211ENST00000482052 1765 ntBASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.12■□□□□ 0.81
TBC1D28Q2M2D7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 AC009299.2-201ENST00000482477 511 ntBASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 AC137630.3-201ENST00000607245 391 ntBASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.11■□□□□ 0.81
TBC1D28Q2M2D7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TBC1D28Q2M2D7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D28Q2M2D7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D28Q2M2D7 KRT125P-201ENST00000546827 989 ntBASIC20.09■□□□□ 0.81
TBC1D28Q2M2D7 Z92544.1-202ENST00000571933 1220 ntBASIC20.09■□□□□ 0.81
TBC1D28Q2M2D7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.09■□□□□ 0.81
TBC1D28Q2M2D7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TBC1D28Q2M2D7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TBC1D28Q2M2D7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.08■□□□□ 0.81
TBC1D28Q2M2D7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
TBC1D28Q2M2D7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.08■□□□□ 0.81
TBC1D28Q2M2D7 AF131216.4-201ENST00000638924 1588 ntBASIC20.08■□□□□ 0.8
TBC1D28Q2M2D7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TBC1D28Q2M2D7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D28Q2M2D7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D28Q2M2D7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.07■□□□□ 0.8
TBC1D28Q2M2D7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D28Q2M2D7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D28Q2M2D7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TBC1D28Q2M2D7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.07■□□□□ 0.8
TBC1D28Q2M2D7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TBC1D28Q2M2D7 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms