Protein–RNA interactions for Protein: P60059

SEC61G, Protein transport protein Sec61 subunit gamma, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61GP60059 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61GP60059 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61GP60059 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61GP60059 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
SEC61GP60059 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
SEC61GP60059 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
SEC61GP60059 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
SEC61GP60059 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
SEC61GP60059 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
SEC61GP60059 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SEC61GP60059 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.03□□□□□ -0.32
SEC61GP60059 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SEC61GP60059 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
SEC61GP60059 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61GP60059 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SEC61GP60059 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.02□□□□□ -0.32
SEC61GP60059 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC13.02□□□□□ -0.32
SEC61GP60059 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61GP60059 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
SEC61GP60059 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
SEC61GP60059 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC13.02□□□□□ -0.33
SEC61GP60059 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61GP60059 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61GP60059 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SEC61GP60059 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 STX6-204ENST00000542060 4809 ntTSL 2 BASIC13.01□□□□□ -0.33
SEC61GP60059 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SEC61GP60059 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SEC61GP60059 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SEC61GP60059 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 AC120498.9-201ENST00000339021 3867 ntBASIC13□□□□□ -0.33
SEC61GP60059 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SEC61GP60059 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SEC61GP60059 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
SEC61GP60059 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC13□□□□□ -0.33
SEC61GP60059 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 AL449106.1-201ENST00000608517 1980 ntBASIC13□□□□□ -0.33
SEC61GP60059 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SEC61GP60059 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SEC61GP60059 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
SEC61GP60059 CASK-201ENST00000378154 2494 ntTSL 5 BASIC13□□□□□ -0.33
SEC61GP60059 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SEC61GP60059 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
SEC61GP60059 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SEC61GP60059 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
SEC61GP60059 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC12.99□□□□□ -0.33
SEC61GP60059 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SEC61GP60059 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61GP60059 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61GP60059 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
SEC61GP60059 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SEC61GP60059 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
SEC61GP60059 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC12.98□□□□□ -0.33
SEC61GP60059 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61GP60059 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61GP60059 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.98□□□□□ -0.33
SEC61GP60059 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61GP60059 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61GP60059 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SEC61GP60059 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
SEC61GP60059 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
SEC61GP60059 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SEC61GP60059 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms