Protein–RNA interactions for Protein: P56557

TMEM50B, Transmembrane protein 50B, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50BP56557 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM50BP56557 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.69■□□□□ 0.74
TMEM50BP56557 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TMEM50BP56557 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM50BP56557 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM50BP56557 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
TMEM50BP56557 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM50BP56557 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TMEM50BP56557 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM50BP56557 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TMEM50BP56557 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.68■□□□□ 0.74
TMEM50BP56557 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TMEM50BP56557 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM50BP56557 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM50BP56557 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM50BP56557 MIR639-201ENST00000384974 98 ntBASIC19.67■□□□□ 0.74
TMEM50BP56557 AC007029.1-201ENST00000604183 313 ntBASIC19.67■□□□□ 0.74
TMEM50BP56557 RAP2CP1-202ENST00000605179 643 ntBASIC19.67■□□□□ 0.74
TMEM50BP56557 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.67■□□□□ 0.74
TMEM50BP56557 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM50BP56557 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.67■□□□□ 0.74
TMEM50BP56557 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TMEM50BP56557 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TMEM50BP56557 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
TMEM50BP56557 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM50BP56557 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM50BP56557 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM50BP56557 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM50BP56557 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TMEM50BP56557 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TMEM50BP56557 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.66■□□□□ 0.74
TMEM50BP56557 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.66■□□□□ 0.74
TMEM50BP56557 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM50BP56557 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM50BP56557 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM50BP56557 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM50BP56557 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM50BP56557 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.65■□□□□ 0.74
TMEM50BP56557 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM50BP56557 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TMEM50BP56557 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.65■□□□□ 0.74
TMEM50BP56557 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TMEM50BP56557 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TMEM50BP56557 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
TMEM50BP56557 KRT18P10-201ENST00000388836 1287 ntBASIC19.64■□□□□ 0.73
TMEM50BP56557 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.64■□□□□ 0.73
TMEM50BP56557 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM50BP56557 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TMEM50BP56557 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
TMEM50BP56557 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM50BP56557 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM50BP56557 AC026202.3-201ENST00000600805 1127 ntBASIC19.63■□□□□ 0.73
TMEM50BP56557 MIR7108-201ENST00000614319 87 ntBASIC19.63■□□□□ 0.73
TMEM50BP56557 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM50BP56557 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM50BP56557 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TMEM50BP56557 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM50BP56557 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM50BP56557 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM50BP56557 AC079834.2-201ENST00000609776 1949 ntBASIC19.63■□□□□ 0.73
TMEM50BP56557 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM50BP56557 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.62■□□□□ 0.73
TMEM50BP56557 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMEM50BP56557 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TMEM50BP56557 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEM50BP56557 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM50BP56557 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.62■□□□□ 0.73
TMEM50BP56557 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM50BP56557 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM50BP56557 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM50BP56557 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEM50BP56557 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TMEM50BP56557 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM50BP56557 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEM50BP56557 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.61■□□□□ 0.73
TMEM50BP56557 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM50BP56557 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TMEM50BP56557 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM50BP56557 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM50BP56557 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM50BP56557 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TMEM50BP56557 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM50BP56557 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM50BP56557 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM50BP56557 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM50BP56557 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM50BP56557 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM50BP56557 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM50BP56557 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM50BP56557 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TMEM50BP56557 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM50BP56557 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms