Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.8■□□□□ 0.92
CASP6P55212 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CASP6P55212 DUX4L19-201ENST00000557448 1267 ntBASIC20.8■□□□□ 0.92
CASP6P55212 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.8■□□□□ 0.92
CASP6P55212 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASP6P55212 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CASP6P55212 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.79■□□□□ 0.92
CASP6P55212 EDA-201ENST00000338901 1233 ntBASIC20.79■□□□□ 0.92
CASP6P55212 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CASP6P55212 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.79■□□□□ 0.92
CASP6P55212 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CASP6P55212 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CASP6P55212 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.79■□□□□ 0.92
CASP6P55212 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASP6P55212 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.79■□□□□ 0.92
CASP6P55212 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
CASP6P55212 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CASP6P55212 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP6P55212 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.78■□□□□ 0.92
CASP6P55212 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP6P55212 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.78■□□□□ 0.92
CASP6P55212 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.78■□□□□ 0.92
CASP6P55212 AC092171.4-201ENST00000609130 632 ntBASIC20.78■□□□□ 0.92
CASP6P55212 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CASP6P55212 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.77■□□□□ 0.92
CASP6P55212 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.77■□□□□ 0.92
CASP6P55212 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP6P55212 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP6P55212 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP6P55212 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP6P55212 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASP6P55212 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CASP6P55212 AL355001.2-201ENST00000620617 1191 ntBASIC20.77■□□□□ 0.92
CASP6P55212 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CASP6P55212 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.77■□□□□ 0.91
CASP6P55212 AC005703.6-201ENST00000623265 1329 ntBASIC20.77■□□□□ 0.91
CASP6P55212 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
CASP6P55212 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.76■□□□□ 0.91
CASP6P55212 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.76■□□□□ 0.91
CASP6P55212 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.76■□□□□ 0.91
CASP6P55212 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP6P55212 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CASP6P55212 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CASP6P55212 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.75■□□□□ 0.91
CASP6P55212 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 ZNRF2P3-201ENST00000424200 374 ntBASIC20.75■□□□□ 0.91
CASP6P55212 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.75■□□□□ 0.91
CASP6P55212 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.75■□□□□ 0.91
CASP6P55212 RARRES2P6-201ENST00000567333 442 ntBASIC20.75■□□□□ 0.91
CASP6P55212 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.75■□□□□ 0.91
CASP6P55212 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.75■□□□□ 0.91
CASP6P55212 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CASP6P55212 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CASP6P55212 AC004448.1-201ENST00000458332 883 ntBASIC20.74■□□□□ 0.91
CASP6P55212 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CASP6P55212 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.74■□□□□ 0.91
CASP6P55212 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.74■□□□□ 0.91
CASP6P55212 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CASP6P55212 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.73■□□□□ 0.91
CASP6P55212 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.73■□□□□ 0.91
CASP6P55212 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP6P55212 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CASP6P55212 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.73■□□□□ 0.91
CASP6P55212 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.73■□□□□ 0.91
CASP6P55212 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.72■□□□□ 0.91
CASP6P55212 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP6P55212 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP6P55212 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP6P55212 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.72■□□□□ 0.91
CASP6P55212 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.72■□□□□ 0.91
CASP6P55212 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CASP6P55212 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP6P55212 AC024257.2-201ENST00000549699 147 ntBASIC20.72■□□□□ 0.91
CASP6P55212 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CASP6P55212 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CASP6P55212 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CASP6P55212 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CASP6P55212 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP6P55212 MIR5787-201ENST00000611784 55 ntBASIC20.71■□□□□ 0.91
CASP6P55212 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CASP6P55212 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CASP6P55212 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASP6P55212 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASP6P55212 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CASP6P55212 SUDS3P1-201ENST00000505831 966 ntBASIC20.7■□□□□ 0.9
CASP6P55212 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.7■□□□□ 0.9
CASP6P55212 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CASP6P55212 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CASP6P55212 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CASP6P55212 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CASP6P55212 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.69■□□□□ 0.9
CASP6P55212 AC092666.2-201ENST00000613287 246 ntBASIC20.69■□□□□ 0.9
CASP6P55212 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms