Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PMS2P54278 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PMS2P54278 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PMS2P54278 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.88■■□□□ 1.41
PMS2P54278 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PMS2P54278 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.87■■□□□ 1.41
PMS2P54278 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PMS2P54278 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
PMS2P54278 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.87■■□□□ 1.41
PMS2P54278 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.87■■□□□ 1.41
PMS2P54278 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PMS2P54278 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS2P54278 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PMS2P54278 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS2P54278 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PMS2P54278 AC012354.3-201ENST00000623734 483 ntBASIC23.86■■□□□ 1.41
PMS2P54278 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PMS2P54278 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
PMS2P54278 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.85■■□□□ 1.41
PMS2P54278 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS2P54278 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.85■■□□□ 1.41
PMS2P54278 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS2P54278 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PMS2P54278 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.85■■□□□ 1.41
PMS2P54278 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.85■■□□□ 1.41
PMS2P54278 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PMS2P54278 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.84■■□□□ 1.41
PMS2P54278 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
PMS2P54278 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
PMS2P54278 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
PMS2P54278 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PMS2P54278 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PMS2P54278 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PMS2P54278 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.83■■□□□ 1.41
PMS2P54278 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.83■■□□□ 1.41
PMS2P54278 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.83■■□□□ 1.4
PMS2P54278 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PMS2P54278 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.82■■□□□ 1.4
PMS2P54278 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PMS2P54278 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PMS2P54278 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PMS2P54278 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
PMS2P54278 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.81■■□□□ 1.4
PMS2P54278 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
PMS2P54278 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
PMS2P54278 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.81■■□□□ 1.4
PMS2P54278 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PMS2P54278 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PMS2P54278 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PMS2P54278 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PMS2P54278 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PMS2P54278 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PMS2P54278 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
PMS2P54278 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.8■■□□□ 1.4
PMS2P54278 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PMS2P54278 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.79■■□□□ 1.4
PMS2P54278 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PMS2P54278 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PMS2P54278 AC025884.2-201ENST00000553429 711 ntBASIC23.79■■□□□ 1.4
PMS2P54278 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PMS2P54278 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PMS2P54278 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PMS2P54278 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PMS2P54278 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.78■■□□□ 1.4
PMS2P54278 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.78■■□□□ 1.4
PMS2P54278 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PMS2P54278 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PMS2P54278 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms