Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.11■□□□□ 0.81
GDNFP39905 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDNFP39905 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDNFP39905 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDNFP39905 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
GDNFP39905 AC022413.1-201ENST00000624602 984 ntBASIC20.11■□□□□ 0.81
GDNFP39905 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
GDNFP39905 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDNFP39905 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GDNFP39905 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GDNFP39905 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GDNFP39905 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
GDNFP39905 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GDNFP39905 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.1■□□□□ 0.81
GDNFP39905 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.1■□□□□ 0.81
GDNFP39905 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GDNFP39905 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.1■□□□□ 0.81
GDNFP39905 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
GDNFP39905 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GDNFP39905 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GDNFP39905 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.1■□□□□ 0.81
GDNFP39905 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
GDNFP39905 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.09■□□□□ 0.81
GDNFP39905 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.09■□□□□ 0.81
GDNFP39905 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.09■□□□□ 0.81
GDNFP39905 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
GDNFP39905 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
GDNFP39905 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
GDNFP39905 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.09■□□□□ 0.81
GDNFP39905 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
GDNFP39905 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
GDNFP39905 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDNFP39905 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDNFP39905 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
GDNFP39905 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDNFP39905 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.08■□□□□ 0.81
GDNFP39905 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
GDNFP39905 AC092296.2-201ENST00000589470 999 ntBASIC20.08■□□□□ 0.81
GDNFP39905 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
GDNFP39905 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.08■□□□□ 0.8
GDNFP39905 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.8
GDNFP39905 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
GDNFP39905 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GDNFP39905 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
GDNFP39905 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.07■□□□□ 0.8
GDNFP39905 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.07■□□□□ 0.8
GDNFP39905 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
GDNFP39905 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDNFP39905 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDNFP39905 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.06■□□□□ 0.8
GDNFP39905 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
GDNFP39905 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDNFP39905 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
GDNFP39905 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
GDNFP39905 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.06■□□□□ 0.8
GDNFP39905 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
GDNFP39905 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.05■□□□□ 0.8
GDNFP39905 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDNFP39905 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.05■□□□□ 0.8
GDNFP39905 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.05■□□□□ 0.8
GDNFP39905 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.05■□□□□ 0.8
GDNFP39905 GPX1-201ENST00000419349 1106 ntBASIC20.05■□□□□ 0.8
GDNFP39905 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDNFP39905 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
GDNFP39905 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.05■□□□□ 0.8
GDNFP39905 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
GDNFP39905 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.05■□□□□ 0.8
GDNFP39905 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
GDNFP39905 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.04■□□□□ 0.8
GDNFP39905 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
GDNFP39905 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.04■□□□□ 0.8
GDNFP39905 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.04■□□□□ 0.8
GDNFP39905 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
GDNFP39905 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
GDNFP39905 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDNFP39905 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GDNFP39905 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
GDNFP39905 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.03■□□□□ 0.8
GDNFP39905 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
GDNFP39905 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
GDNFP39905 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.03■□□□□ 0.8
GDNFP39905 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GDNFP39905 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
GDNFP39905 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GDNFP39905 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.02■□□□□ 0.8
GDNFP39905 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
GDNFP39905 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.02■□□□□ 0.8
GDNFP39905 AC025884.2-201ENST00000553429 711 ntBASIC20.02■□□□□ 0.8
GDNFP39905 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
GDNFP39905 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
GDNFP39905 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.02■□□□□ 0.79
GDNFP39905 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms