Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.65■■□□□ 1.06
PDGFAP04085 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
PDGFAP04085 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PDGFAP04085 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.65■■□□□ 1.06
PDGFAP04085 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
PDGFAP04085 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.65■■□□□ 1.06
PDGFAP04085 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
PDGFAP04085 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
PDGFAP04085 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PDGFAP04085 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
PDGFAP04085 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PDGFAP04085 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PDGFAP04085 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PDGFAP04085 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.64■■□□□ 1.05
PDGFAP04085 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
PDGFAP04085 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PDGFAP04085 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDGFAP04085 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.63■■□□□ 1.05
PDGFAP04085 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.63■■□□□ 1.05
PDGFAP04085 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PDGFAP04085 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFAP04085 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFAP04085 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDGFAP04085 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
PDGFAP04085 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFAP04085 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFAP04085 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFAP04085 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.61■■□□□ 1.05
PDGFAP04085 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFAP04085 PBX2P1-201ENST00000493219 1291 ntBASIC21.61■■□□□ 1.05
PDGFAP04085 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.61■■□□□ 1.05
PDGFAP04085 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.61■■□□□ 1.05
PDGFAP04085 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.61■■□□□ 1.05
PDGFAP04085 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFAP04085 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDGFAP04085 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.6■■□□□ 1.05
PDGFAP04085 AC106739.1-201ENST00000617035 715 ntBASIC21.6■■□□□ 1.05
PDGFAP04085 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.59■■□□□ 1.05
PDGFAP04085 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFAP04085 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.59■■□□□ 1.05
PDGFAP04085 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.59■■□□□ 1.05
PDGFAP04085 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.59■■□□□ 1.05
PDGFAP04085 AC093323.1-202ENST00000635031 2045 ntBASIC21.59■■□□□ 1.05
PDGFAP04085 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFAP04085 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFAP04085 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFAP04085 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDGFAP04085 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDGFAP04085 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.58■■□□□ 1.05
PDGFAP04085 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDGFAP04085 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDGFAP04085 RARRES2P6-201ENST00000567333 442 ntBASIC21.58■■□□□ 1.05
PDGFAP04085 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.58■■□□□ 1.05
PDGFAP04085 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC21.58■■□□□ 1.05
PDGFAP04085 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDGFAP04085 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDGFAP04085 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.58■■□□□ 1.04
PDGFAP04085 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDGFAP04085 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFAP04085 FOXO3B-201ENST00000395675 1928 ntBASIC21.57■■□□□ 1.04
PDGFAP04085 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFAP04085 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.57■■□□□ 1.04
PDGFAP04085 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.57■■□□□ 1.04
PDGFAP04085 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFAP04085 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFAP04085 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PDGFAP04085 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.56■■□□□ 1.04
PDGFAP04085 AC142381.2-201ENST00000566120 298 ntBASIC21.56■■□□□ 1.04
PDGFAP04085 SNX5-217ENST00000606557 1087 ntBASIC21.56■■□□□ 1.04
PDGFAP04085 AL031432.3-201ENST00000607698 485 ntBASIC21.56■■□□□ 1.04
PDGFAP04085 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PDGFAP04085 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PDGFAP04085 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFAP04085 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC21.55■■□□□ 1.04
PDGFAP04085 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PDGFAP04085 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFAP04085 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFAP04085 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PDGFAP04085 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.55■■□□□ 1.04
PDGFAP04085 UNC93B3-201ENST00000308076 687 ntBASIC21.54■■□□□ 1.04
PDGFAP04085 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFAP04085 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFAP04085 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
PDGFAP04085 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFAP04085 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.54■■□□□ 1.04
PDGFAP04085 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFAP04085 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PDGFAP04085 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
PDGFAP04085 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.54■■□□□ 1.04
PDGFAP04085 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PDGFAP04085 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFAP04085 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFAP04085 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFAP04085 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PDGFAP04085 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
PDGFAP04085 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.53■■□□□ 1.04
PDGFAP04085 AC092666.2-201ENST00000613287 246 ntBASIC21.53■■□□□ 1.04
PDGFAP04085 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFAP04085 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PDGFAP04085 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms