Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
ABCC4O15439 KRT16P3-201ENST00000439127 1283 ntBASIC29.81■■■□□ 2.36
ABCC4O15439 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC29.81■■■□□ 2.36
ABCC4O15439 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ABCC4O15439 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
ABCC4O15439 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC29.81■■■□□ 2.36
ABCC4O15439 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ABCC4O15439 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
ABCC4O15439 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC29.8■■■□□ 2.36
ABCC4O15439 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.8■■■□□ 2.36
ABCC4O15439 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.79■■■□□ 2.36
ABCC4O15439 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC29.79■■■□□ 2.36
ABCC4O15439 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
ABCC4O15439 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.79■■■□□ 2.36
ABCC4O15439 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC29.79■■■□□ 2.36
ABCC4O15439 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
ABCC4O15439 AC021242.3-201ENST00000607598 1377 ntBASIC29.78■■■□□ 2.36
ABCC4O15439 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ABCC4O15439 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.78■■■□□ 2.36
ABCC4O15439 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ABCC4O15439 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
ABCC4O15439 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
ABCC4O15439 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC29.77■■■□□ 2.36
ABCC4O15439 AP003733.4-201ENST00000623785 1697 ntBASIC29.77■■■□□ 2.36
ABCC4O15439 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
ABCC4O15439 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
ABCC4O15439 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC29.76■■■□□ 2.36
ABCC4O15439 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.76■■■□□ 2.36
ABCC4O15439 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC29.76■■■□□ 2.35
ABCC4O15439 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
ABCC4O15439 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
ABCC4O15439 TSPY9P-201ENST00000440215 945 ntBASIC29.75■■■□□ 2.35
ABCC4O15439 TSPY11P-201ENST00000442607 1045 ntBASIC29.75■■■□□ 2.35
ABCC4O15439 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC29.75■■■□□ 2.35
ABCC4O15439 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
ABCC4O15439 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ABCC4O15439 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.74■■■□□ 2.35
ABCC4O15439 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
ABCC4O15439 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.74■■■□□ 2.35
ABCC4O15439 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCC4O15439 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCC4O15439 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.73■■■□□ 2.35
ABCC4O15439 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC29.73■■■□□ 2.35
ABCC4O15439 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
ABCC4O15439 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.73■■■□□ 2.35
ABCC4O15439 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.73■■■□□ 2.35
ABCC4O15439 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
ABCC4O15439 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ABCC4O15439 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ABCC4O15439 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC29.72■■■□□ 2.35
ABCC4O15439 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
ABCC4O15439 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
ABCC4O15439 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC29.72■■■□□ 2.35
ABCC4O15439 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC29.71■■■□□ 2.35
ABCC4O15439 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
ABCC4O15439 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC29.71■■■□□ 2.35
ABCC4O15439 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
ABCC4O15439 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
ABCC4O15439 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
ABCC4O15439 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC29.71■■■□□ 2.35
ABCC4O15439 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
ABCC4O15439 AC090877.2-201ENST00000558441 1738 ntBASIC29.7■■■□□ 2.35
ABCC4O15439 AL139125.2-201ENST00000623134 1869 ntBASIC29.7■■■□□ 2.35
ABCC4O15439 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.7■■■□□ 2.34
ABCC4O15439 SSSCA1-AS1-201ENST00000567594 614 ntBASIC29.7■■■□□ 2.34
ABCC4O15439 MIR4281-201ENST00000580852 62 ntBASIC29.7■■■□□ 2.34
ABCC4O15439 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC29.7■■■□□ 2.34
ABCC4O15439 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.34
ABCC4O15439 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
ABCC4O15439 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
ABCC4O15439 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.69■■■□□ 2.34
ABCC4O15439 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC29.69■■■□□ 2.34
ABCC4O15439 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.69■■■□□ 2.34
ABCC4O15439 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC29.69■■■□□ 2.34
ABCC4O15439 EED-207ENST00000528180 1745 ntTSL 5 BASIC29.68■■■□□ 2.34
ABCC4O15439 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
ABCC4O15439 AC011551.1-201ENST00000614101 683 ntBASIC29.68■■■□□ 2.34
ABCC4O15439 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.67■■■□□ 2.34
ABCC4O15439 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCC4O15439 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
ABCC4O15439 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.67■■■□□ 2.34
ABCC4O15439 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCC4O15439 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC29.66■■■□□ 2.34
ABCC4O15439 AC092028.1-203ENST00000608262 953 ntBASIC29.66■■■□□ 2.34
ABCC4O15439 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
ABCC4O15439 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
ABCC4O15439 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC29.65■■■□□ 2.34
ABCC4O15439 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
ABCC4O15439 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
ABCC4O15439 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
ABCC4O15439 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
ABCC4O15439 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
ABCC4O15439 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC29.64■■■□□ 2.34
ABCC4O15439 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.64■■■□□ 2.34
ABCC4O15439 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC29.64■■■□□ 2.33
ABCC4O15439 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCC4O15439 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.63■■■□□ 2.33
ABCC4O15439 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC29.63■■■□□ 2.33
ABCC4O15439 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
ABCC4O15439 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms