Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC27.87■■■□□ 2.05
FOXN1O15353 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC27.87■■■□□ 2.05
FOXN1O15353 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC27.87■■■□□ 2.05
FOXN1O15353 TFPT-201ENST00000391757 774 ntTSL 5 BASIC27.86■■■□□ 2.05
FOXN1O15353 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
FOXN1O15353 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC27.86■■■□□ 2.05
FOXN1O15353 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC27.85■■■□□ 2.05
FOXN1O15353 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
FOXN1O15353 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
FOXN1O15353 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC27.85■■■□□ 2.05
FOXN1O15353 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC27.85■■■□□ 2.05
FOXN1O15353 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
FOXN1O15353 AC092437.1-201ENST00000624794 1048 ntBASIC27.85■■■□□ 2.05
FOXN1O15353 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.84■■■□□ 2.05
FOXN1O15353 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.84■■■□□ 2.05
FOXN1O15353 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC27.84■■■□□ 2.05
FOXN1O15353 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC27.84■■■□□ 2.05
FOXN1O15353 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC27.84■■■□□ 2.05
FOXN1O15353 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC27.84■■■□□ 2.05
FOXN1O15353 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
FOXN1O15353 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
FOXN1O15353 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
FOXN1O15353 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC27.83■■■□□ 2.05
FOXN1O15353 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC27.83■■■□□ 2.05
FOXN1O15353 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.82■■■□□ 2.04
FOXN1O15353 ASB1-202ENST00000409297 878 ntTSL 5 BASIC27.82■■■□□ 2.04
FOXN1O15353 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
FOXN1O15353 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC27.81■■■□□ 2.04
FOXN1O15353 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.81■■■□□ 2.04
FOXN1O15353 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
FOXN1O15353 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
FOXN1O15353 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
FOXN1O15353 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
FOXN1O15353 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
FOXN1O15353 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
FOXN1O15353 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
FOXN1O15353 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC27.8■■■□□ 2.04
FOXN1O15353 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC27.8■■■□□ 2.04
FOXN1O15353 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.8■■■□□ 2.04
FOXN1O15353 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
FOXN1O15353 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
FOXN1O15353 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
FOXN1O15353 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC27.79■■■□□ 2.04
FOXN1O15353 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
FOXN1O15353 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC27.78■■■□□ 2.04
FOXN1O15353 SRD5A1P1-201ENST00000442297 786 ntBASIC27.78■■■□□ 2.04
FOXN1O15353 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
FOXN1O15353 CA15P2-201ENST00000611168 834 ntBASIC27.78■■■□□ 2.04
FOXN1O15353 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
FOXN1O15353 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
FOXN1O15353 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
FOXN1O15353 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
FOXN1O15353 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
FOXN1O15353 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
FOXN1O15353 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.77■■■□□ 2.04
FOXN1O15353 JTB-203ENST00000368589 1216 ntTSL 2 BASIC27.77■■■□□ 2.04
FOXN1O15353 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
FOXN1O15353 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
FOXN1O15353 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
FOXN1O15353 SLC47A1P1-202ENST00000449666 945 ntBASIC27.76■■■□□ 2.03
FOXN1O15353 MAG-206ENST00000597035 542 ntTSL 4 BASIC27.76■■■□□ 2.03
FOXN1O15353 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
FOXN1O15353 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
FOXN1O15353 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
FOXN1O15353 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
FOXN1O15353 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
FOXN1O15353 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC27.74■■■□□ 2.03
FOXN1O15353 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC27.74■■■□□ 2.03
FOXN1O15353 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
FOXN1O15353 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
FOXN1O15353 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
FOXN1O15353 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
FOXN1O15353 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
FOXN1O15353 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
FOXN1O15353 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.03
FOXN1O15353 IRS3P-201ENST00000223076 1006 ntBASIC27.73■■■□□ 2.03
FOXN1O15353 AC004911.1-201ENST00000416316 871 ntBASIC27.73■■■□□ 2.03
FOXN1O15353 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC27.73■■■□□ 2.03
FOXN1O15353 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
FOXN1O15353 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC27.73■■■□□ 2.03
FOXN1O15353 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC27.73■■■□□ 2.03
FOXN1O15353 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
FOXN1O15353 AC142472.1-201ENST00000612013 1741 ntBASIC27.72■■■□□ 2.03
FOXN1O15353 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
FOXN1O15353 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 AC034268.1-201ENST00000441047 882 ntBASIC27.72■■■□□ 2.03
FOXN1O15353 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC27.72■■■□□ 2.03
FOXN1O15353 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
FOXN1O15353 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.72■■■□□ 2.03
FOXN1O15353 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
FOXN1O15353 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
FOXN1O15353 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
FOXN1O15353 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.71■■■□□ 2.03
FOXN1O15353 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms