Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 MIR6089-201ENST00000616698 64 ntBASIC20.95■□□□□ 0.94
SMAD9O15198 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD9O15198 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SMAD9O15198 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.95■□□□□ 0.94
SMAD9O15198 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMAD9O15198 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMAD9O15198 AC090877.2-201ENST00000558441 1738 ntBASIC20.94■□□□□ 0.94
SMAD9O15198 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMAD9O15198 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SMAD9O15198 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD9O15198 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
SMAD9O15198 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMAD9O15198 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMAD9O15198 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SMAD9O15198 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.93■□□□□ 0.94
SMAD9O15198 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.93■□□□□ 0.94
SMAD9O15198 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
SMAD9O15198 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 AL451085.2-201ENST00000605085 799 ntBASIC20.92■□□□□ 0.94
SMAD9O15198 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.92■□□□□ 0.94
SMAD9O15198 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD9O15198 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD9O15198 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.91■□□□□ 0.94
SMAD9O15198 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD9O15198 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.91■□□□□ 0.94
SMAD9O15198 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD9O15198 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD9O15198 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD9O15198 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD9O15198 AC142381.3-201ENST00000568208 1670 ntBASIC20.9■□□□□ 0.94
SMAD9O15198 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.9■□□□□ 0.94
SMAD9O15198 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.9■□□□□ 0.94
SMAD9O15198 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.9■□□□□ 0.94
SMAD9O15198 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.9■□□□□ 0.94
SMAD9O15198 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD9O15198 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SMAD9O15198 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.89■□□□□ 0.94
SMAD9O15198 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMAD9O15198 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMAD9O15198 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SMAD9O15198 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD9O15198 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD9O15198 MIR4281-201ENST00000580852 62 ntBASIC20.89■□□□□ 0.93
SMAD9O15198 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD9O15198 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD9O15198 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD9O15198 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD9O15198 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD9O15198 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.88■□□□□ 0.93
SMAD9O15198 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD9O15198 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD9O15198 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.88■□□□□ 0.93
SMAD9O15198 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD9O15198 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD9O15198 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD9O15198 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD9O15198 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.88■□□□□ 0.93
SMAD9O15198 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD9O15198 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD9O15198 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD9O15198 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD9O15198 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.87■□□□□ 0.93
SMAD9O15198 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD9O15198 AC138932.3-201ENST00000567634 1902 ntBASIC20.87■□□□□ 0.93
SMAD9O15198 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD9O15198 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.86■□□□□ 0.93
SMAD9O15198 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.86■□□□□ 0.93
SMAD9O15198 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.86■□□□□ 0.93
SMAD9O15198 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.86■□□□□ 0.93
SMAD9O15198 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD9O15198 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD9O15198 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SMAD9O15198 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SMAD9O15198 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD9O15198 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD9O15198 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SMAD9O15198 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
SMAD9O15198 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
SMAD9O15198 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.84■□□□□ 0.93
SMAD9O15198 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SMAD9O15198 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SMAD9O15198 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD9O15198 AC009299.2-201ENST00000482477 511 ntBASIC20.84■□□□□ 0.93
SMAD9O15198 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD9O15198 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD9O15198 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.84■□□□□ 0.93
SMAD9O15198 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SMAD9O15198 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD9O15198 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD9O15198 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD9O15198 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD9O15198 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SMAD9O15198 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms